منابع مشابه
Dynamic BLAST – a Grid Enabled BLAST
Basic Local Alignment Search Tool (BLAST) is a heavily used bioinformatics application that has gotten significant attention from the high performance computing community. The authors have taken BLAST execution a step further and enabled it to execute on grid resources. Adapting BLAST to execute on the grid brings up concerns regarding grid resource heterogeneity, which inevitably cause difficu...
متن کاملG-BLAST: A Grid Service for BLAST
This paper described the design and implementation of G-BLAST – a Grid Service for one of the most widely used bioinformatics application Basic Local Alignment Search Tool (BLAST). G-BLAST uses the factory design pattern to provide application developers a common interface to incorporate multiple implementations of BLAST. The process of application selection, resource selection, scheduling, and...
متن کاملpp-Blast: a "pseudo-parallel" Blast.
We have developed a software called pp-Blast that uses the publicly available Blast package and PVM (parallel virtual machine) to partition a multi-sequence query across a set of nodes with replicated or shared databases. Benchmark tests show that pp-Blast running in a cluster of 14 PCs outperformed conventional Blast running in large servers. In addition, using pp-Blast and the cluster we were...
متن کاملBlast injuries.
From the Medical-Surgical Group, Office of Patient Care Services (R.G.D.), and the Office of Public Health and Environmental Hazards (M.J.H.), Veterans Health Administration, Washington, D.C.; and the Uniformed Services University of the Health Sciences, Bethesda, Md. (D.G.B., H.R.C.). Address reprint requests to Dr. DePalma at the Office of Patient Care Services, Veterans Health Administration...
متن کاملFrancesco Blast
Hog thyroid tautomerase (EC 5.3.2.1, phenylpyruvate keto-enol isomerase), an enzyme which is believed to play a role in the biosynthesis of thyroxine, has been purified over lOOO-fold. The purification procedure involves a heat step at 70”, gel f&ration on Sephadex G-100, ion exchange chromatography on carboxymethyl Sephadex C-50, and, finally, gel titration on Sephadex G-50. The enzyme is homo...
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ژورنال
عنوان ژورنال: Proceedings of the VLDB Endowment
سال: 2016
ISSN: 2150-8097
DOI: 10.14778/2994509.2994533